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… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The … new features like a public API and ecosystem landing page, as well as the growth of different entities,  further … Science of the U.S. Department of Energy operated [DE-AC02-05CH11231]; National Energy Research Scientific Computing …

… were involved in that were reported on over the last year: Kerrie Barry and Jeremy Schmutz worked with a …

… working with us please contact me at [email protected] 5.  Q: If we have RNAseq or proteome data that is based on a … not covered in these tutorials 6.  Q: On the genome synteny page, would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that might be duplicated? A: Yes, we do routinely …

… shared their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: … even know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in Quantitative and Systems …

… scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … microbial sciences field. Roux will be recognized at the 2025 ASM Microbe Meeting in Los Angeles, Calif.  Roux is also … (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral ecogenomics” …

… Scattering (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations …

… genome assembly and annotation. Genome contiguity of the 2025 phased reference and 2014 diploid genome reference was … had a gene annotation completement level of 93.8%. The 2025 assembly has a gene annotation completement level of … two assemblies, the researchers also noticed that the 2025 haplotype-phased assemblies are 70–90 Mbp smaller than the …

… DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and … for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex Chromosomes in the Moss Ceratodon … Response 7:27 PM Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  …

… C, Xu J, Northen T, Visel A , Bristow J, Niyogi KK, Wei CL (2015).  Lineage-specific chromatin signatures reveal a … Timmermann B, Hecht J, Spielmann M, Visel A , Mundlos S. (2015).  Disruptions of topological chromatin domains cause …

… (APS) at Argonne National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters … growth chamber is limited so that will have to be planned. Q5: Is travel covered by the FICUS proposal? A: Since there’s …

… in March 2027 at the Oakland Convention Center. Check this page as further details become available. Sign up for our …