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… showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) … such as cement or adhesives. Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy … This work was supported by the U.S. Department of Energy, Office of Science, Office of Biological and …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … also processed using the JGI-developed software suite, BBTools , and relying on the JGI Integrated Microbial Genomes … Processes and Ecology and the Daniel K. Inouye Center for Microbial Oceanography: Research and Education. …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s … An assay used for profiling transcription factor binding sites across entire …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical … Please review our FAQ in advance of contacting the PMO office.  … start on any approved proposal – including the submission of samples for sequencing, or the submission of sequencing …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Nobel Foundation as having “a revolutionary impact on the life sciences.” Building upon CRISPR-Cas9 work, the Doudna … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense …

… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. Originally from northern California … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the …

… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … But some viruses are also able to play a long game. In a lifestyle called lysogeny, they can insinuate themselves …

… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) … functional assay lets us move beyond cataloging the genes of microorganisms and start making quantitative measurements …

… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and … publications and software. The JGI supports the entire data life cycle, and embeds metadata and its curation in our core … Looking for BBTools? Find it here.  …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … do on the leaf surface. More specifically, they found that microbial community composition and functional potential varied across tree species and sites, reflecting ecological patterns …