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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Nobel Foundation as having “a revolutionary impact on the life sciences.” Building upon CRISPR-Cas9 work, the Doudna … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense …
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Protocols
… by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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JGI Accepts 17 Proposals for Community Science Program
Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … diversity within the eucalypts, a group of fast-growing tree species that are widely grown as feedstocks for …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Micro-Scale Applications Group
Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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The JGI announces FY25 awardees for our Community Science Program Annual Call
Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) … of which are first-time PIs on a JGI proposal,” said Tanja Woyke , JGI’s deputy of User Programs. “The proposed …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … But some viruses are also able to play a long game. In a lifestyle called lysogeny, they can insinuate themselves …
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