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The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: …

… research has been focused on semantic and object-oriented data modeling, and biological data management. She was one … of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. … K, Ratner A, Huang J, Huntemann M, Hajek P, Ritter SJ, Webb C et al. The IMG/M data management and analysis system …

… had in my group which was bioengineering bio-process R&D, BBRD, a group of about 75 people. So our biggest project was … using these together along with all of our computational tools to really build out much more of an integrative … heard me speak recently have heard me talk about the new data portal that we’re building. And I’ve been eager to …

… begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to … advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, depending on the specific product types covered in the …

… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … geNomad is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In order to … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …

JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, … viral genomics resources such as analytical tools and data repositories to two projects funded through the …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to … a fruitful experience for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual …

… — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … which microbes are present in a sample, to generate data about which organisms are active, and which microbes … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication …