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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of bacteria with diverse metabolic activities. Found in marine and terrestrial environments, actinobacteria play … part of Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current …
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A unified initiative to harness Earth's microbiomes
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Jeremy Schmutz
… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies …
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Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount
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Crysten Blaby-Haas
… the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Igor Grigoriev
… of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched …
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Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment
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Improving the Cacao Genome and Phytozome
… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  …
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JGI announces 2025 Functional Genomics awardees
… genomic information into biological function. Through our  CSP Functional Genomics call , we look for projects that … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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