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Jeremy Schmutz
Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve … improvement. Nature Genetics 52: 525-533. Lovell, JT et al. 2018. The genomic landscape of molecular responses to …
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Natural Prodcast Episode 3: The Primer, Part 3
… and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do … proteins that are enzymes that are doing the reactions to generate secondary metabolites. ALISON: Sounds easy enough? …
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Evolution of a Fungal Gene Expression Regulator
… date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep … code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from … they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. They looked …
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Advances on genomics, biology, ecology and evolution of Brachypodium, a bridging model grass system for cereals and biofuel grasses
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The Sorghum bicolor genome and the diversification of grasses
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An Integrated Dataset to Understand Ecosystem Interaction
Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … water-quality regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry offers insights into how these …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In … resource that provides information at multiple scales from genes to the community level. The Impact Rivers are … sampling locations. Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing …
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
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Axel Visel
… where he developed novel tools for large-scale in situ gene expression analysis in multicellular organisms. During … and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate genomes, which led … and implementation of scientific policy, engaging in interactions with the scientific community at large. … 2021 …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the …
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