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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore play a … is not limited to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to …
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Domain shuffling and the evolution of vertebrates
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The Busy World of Deep Sea Eruptions
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Tracking the Origins of Methane-Producing Microbes
… methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … applied mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome … for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse …
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Reevaluating the Salty Divide: Phylogenetic Specificity of Transitions between Marine and Freshwater Systems
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Busting the Unbreakable Lignin
… skeleton. It’s more complex, and poisons enzymes and the  microbes that make them. It’s known that aerobic fungi, like … Centers, the Joint BioEnergy Institute and the Great Lakes Bioenergy Research Center. O’Malley is also affiliated … JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also …
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Depth-discrete metagenomics reveals the roles of microbes in biogeochemical cycling in the tropical freshwater Lake Tanganyika
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Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines
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Examples: Successful LOIs & Submissions
… Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated … strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic flexibility? … Elucidation of the gene regulatory networks governing terpenoid-mediated plant …
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Products
… Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … Assembly, annotation ( IMG ), methylation analysis 131/176 Microbial Single Particle Sort Draft quality …
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Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments
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