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Powdery mildew induces chloroplast storage lipid formation at the expense of host thylakoids to promote spore production
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… are solicited annually for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for faculty members and students who …
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Refining the Process of Identifying Algae Biotechnology Candidates
… ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae … feedstocks that can thrive in saltwater mitigates concerns about diverting resources such as arable land and fresh … characterize more industrially relevant algal strains, and chart exploratory paths for strain improvements.   … This …
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Computationally Classifying Fungal Lifestyles
… and many plant pathogens known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what they’re …
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Progress Reports: 2002–2020
Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  … FY20 … Report … FY17 Progress Report … FY16 Progress Report … FY15 Progress Report … FY14 Progress Report … FY13 Progress …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … microbiome activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and … is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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UC Merced Interns Reflect on Their JGI Summer Projects
… wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI … Click the image to watch the video … Intern: Brendan Blasius (undergraduate) Mentor: Guohong "Albert" Wu Click the …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …
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Frequently Asked Questions: Project Management
Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal … done for my project? … What JGI-related meetings or workshops are available to me? …
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic … thought-provoking flash talks, and instructive workshops. Researchers from academia, government, and industry, … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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