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In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop … … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of …

Sugarcane was the last major crop without a reference quality genome … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …

Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

…   Visualizing a novel, candidate viral genome found in the deep … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these …

Large-scale comparative analysis leads to identification of … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … of metagenome-assembled genomes (MAGs) directly from sequenced environmental samples without needing to cultivate …

As warm-adapted microbes edge polewards, they’d oust … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …

Machine learning methods were applied on sequenced fungal … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was established …

Jan. 7: New Capabilities to Study Secondary Metabolism   … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

Uri Neri is a computational biologist who spends his days wrangling viral … messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique …

Bacterial enzymes play second fiddle to those from fungi when … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from their soil samples. This …