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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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A Step Toward Controlling Soybean Rust
… soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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MGM Workshop at Fisabio Summer School 2025
… will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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A Natural Mechanism Can Turbocharge Viral Evolution
The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … on its tail fibers to latch onto a specific target on the microbial cell’s membrane. Two decades ago, a team … and through a Challenge Grant from the California NanoSystems Institute at the University of California Santa …
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Creating an Energy Market for Miscanthus
What grass is a prized ornamental and a bioenergy plant? Meet Miscanthus , an attractive addition to your … biology and the economic terrain to help make the plant a viable alternative to fossil fuels. …
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Ben Bowen
… with high-performance computing and metabolite atlases. Metabolites, 5(3), 431–442. Yang, J., Rubel, O., Prabhat, …
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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2022 Progress Report
DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary across … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the … co-lead author of the study with Kara Martin. “But these ecosystems are literally melting away.” Driven by climate …
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The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle
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Busting the Unbreakable Lignin
… evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … them down.  Lignin is a structural component for the plant, like the brick-and-mortar of a building or the human …
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