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Kjiersten Fagnan
… on supercomputing hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. … head.  Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she leads infrastructure … E.M., Anubhav, Auberry, D. et al. The National Microbiome Data Collaborative: enabling microbiome science. …
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Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree
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RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle
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Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
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Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information
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Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites
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BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution … The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a … The Impact This research provides a much more comprehensive understanding of how a fundamental mechanism of evolution — …
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MGM Workshop at Fisabio Summer School
… research results in genomics, metagenomics and the human microbiome. The workshop will train participants in …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are hermaphrodites, … need to select and breed cultivars for the next generation. Understanding the mechanisms by which they reproduce can … poplar for which genes might be shared in common between poplar’s Y — poplar has an XY system — and shrub …
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