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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv University in Israel, the … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the … giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of … with an experienced researcher who serves as their mentor. By contributing to projects that will help them build skills …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Leo Baumgart
… his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … a method that enables high-throughput characterization of transcription factor binding sites and which has been … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular … at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … Biodesign and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … analytics platform provided to the research community by DOE. Email [email protected] if you have questions about … the 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new … striving for sustainability in lab spaces as well as offices. These efforts dovetail into sustainability … program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas …
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