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2023 Progress Report
Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … data, and professional expertise to support the global research community in studies of complex biological and …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Tanja Woyke , JGI’s deputy of User Programs. “The proposed research by these PIs will address a broad diversity of …
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … Data Collaborative.  This award recognizes distinguished research achievements that support open data practices, …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada (CICESE) in her …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write … first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … terabytes of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … mycobiont. However, despite a century-and-a-half of lichen research, many of the symbiosis’ details remain unclear. For …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … the JGI and KBase toward integrative biology and hear from researchers who are applying genomic sequence information to …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental … thought-provoking flash talks, and instructive workshops. Researchers from academia, government, and industry, are … more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … genome, the JGI has also continued to collaborate on research to understand how sorghum fares so well in harsh … John Mullet (Texas A & M and Great Lakes Bioenergy Research Center) and his team set out to compare different …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for …
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