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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be … solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …
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JGI announces second round of 2023 New Investigator awardees
Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any … find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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Robert Bowers
… uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the … at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding … metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic …
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The Power of One, Amplified
… cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … between the analyzed community members. The Impact Though microbes help regulate the planet’s nutrient cycles and are … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural …
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Danielle Goudeau
… flow cytometry protocols for targeted recovery of specific microbes. …
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Waiting to Respire
… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams … postdoctoral fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed … MAGs later dubbed Saganbacteria. At the same time, working with researchers from the Bigelow Laboratory for Ocean …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and … that I’ve been in my PhD program, I’ve been really focused with academia. And so this was the first time I was … my interest in bioformatics, so that’s what I’m gonna take with me to the future.  Shari Larsen : I didn’t grow up with …
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iPHoP: A Matchmaker for Phages and their Hosts
… to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of … microbial communities. One day, these phages could boost plant-microbe interactions, nutrient cycling, or carbon …
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