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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects … a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … protocol for higher efficiency in Issatchenkia orientalis using electroportation and heat shock methods Asees Kaur …
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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he … Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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MGM Workshop at Fisabio Summer School 2026
… 4 of the Fisabio Summer School.  The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning and sharing …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… Gary Trubl, a virologist and postdoc at Lawrence Livermore National Laboratory, is using bioinformatics and isotopes to track how viruses …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & …
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Benjamin Cole
… studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … by altering their growth program, and on how plants coordinate their gene expression with light and temperature … on understanding how microbes can colonize plant roots, focusing on genetic components required for effective …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. … the Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and … and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental …
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