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JGI announces 2023 CSP Functional Genomics awardees
… research from potential users who need help translating genomic information into biological function. Through our CSP … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … these nutrient cycles can help researchers contribute toward developing the bioeconomy. Now, JGI researchers are … viruses are likely to infect, and (iii) identifying the genetic traits of the viruses to better understand their …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship … LaMonika Dent : We have been working on creating transgenic plants with CRISPR Cas9 knockout mutants to observe and …
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JGI announces final round of 2022 Functional Genomics awardees
… research from potential users who need help translating genomic information into biological function. Through our CSP … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
Learn more
Bacteria and Fungi Divvy Up the Work in Forest Floor
… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … sequences (transcriptomes) from their soil samples. This gene expression dataset was particularly important for …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced … could be considered.” Olmstead’s project focused on the genetic mechanisms of chemotaxis in the Arabidopsis … microbiome, particularly, how bacteria can be driven toward compounds produced by the plant roots. He is now …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The … that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … between the two institutions to help train the next generation workforce.  Since its inception in 2014, more … interface, which at a larger scale may be applicable towards carbon, and especially methane, budgets in the face …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership … to learn more about the program's areas of focus, major initiatives and more.  … B.S. in Chemical Engineering, University of California Santa Barbara Ph.D. in …
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10 From JGI on the 2019 Highly Cited Researchers List
… their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … Genomics Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal … the team established community gardens of switchgrass plants in 10 different field sites on a north-south gradient …
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JGI Workshop at SIMB NP Meeting
… and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …
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