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… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, … novel flow cytometry protocols for targeted recovery of specific microbes. …

… Jasmyn provides bioinformatics tools and analysis support for user science, … and collaboration, she works to develop and improve supporting pipeline efficiency through streamlined workflows, …

… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also …

… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … viral diversity. “Although the technical challenges of data analysis at this scale are formidable.” Computational Sieves …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … 2007, the JGI has been working on identifying switchgrass genes related to biomass production, drought tolerance, and …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … Metabolic Engineering Approach for Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … Arkin, AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature …

… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … to identify the microbes. And in order to determine what genes the algae were expressing, the team sequenced their …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute …

… Do metabolic pathways from engineered yeasts still work in cell-free environments? … Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … Metabolic Engineering Approach for Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our …