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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their … whether it was developing my coding abilities or guiding me through challenges I was encountering. I aspire to pass on …
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Axel Visel
Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … … 2021 LBNL Director’s Award for Exceptional Achievement in Diversity 2014 LBNL Director’s Award for Exceptional … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and her team are …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … in genomics, including JGI, is not representative of the diversity in the population, especially here in California. … expanded to include UC Merced undergraduate students through the California Alliance for Minority Participation …
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from … fungi synthesize molecules that are sources of new chemical diversity; the team identified what looked to be three …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by the JGI … JGI is uniquely positioned to enable this kind of science; through its DNA Synthesis Science Program , the JGI enables … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … CouR, a MarR family transcriptional regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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DOE JGI Interns Share Their Summer Experiences
… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns …
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Party in the Rhizosphere
VIPs. They’re feasting on the compounds that plants secrete through their roots, creating a lively zone called the … rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play … Microbiome . The work builds off a proposal approved through a collaborative science initiative called Facilities …
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Introducing New Members of the JGI User Executive Committee
… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to … to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually … molecular mechanisms can help researchers better model global carbon and nitrogen cycling. Summary To shed light on …
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