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Building Wet and Dry Lab Skills
… the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training … and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study … Sharon Greenblum : And it’s been fun. I mean. It’s been really fun working with the both of you. I have been so …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the sample’s …
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Finding the Fermenters
… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of … ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the organisms can use to thrive, …
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Ben Bowen
… State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & … Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for Exceptional Achievement 2012 UC Berkeley, … and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate …
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …
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Statement on the Use of Genomics Data
… of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to … to be moved to private status. This will remove records from search indexes and BLAST databases until such time that … facilitating the open use of data for the benefit of the worldwide research community. …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the …
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How To Use Our Systems
… and its curation in our core processes. This allows us to provide diverse scientific communities with large amounts … high-quality data and metadata, and connect our data to the broader biological data ecosystem. Our community of … tens of thousands of researchers. The JGI is always seeking to better understand our broader community of users. Each …
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“A STEM career is in reach and accessible”
… Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech … that increase participation in higher education and access to fulfilling science careers, JGI hosted five students from …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … Summary The two most common methods for collecting genomes from microorganisms are shotgun (group) metagenomic …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State … of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis …
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