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… large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … sequence of the complex switchgrass genome , using samples from common gardens growing across the country. The national … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …

… DNA or RNA contained in a sample that has been collected from any kind of environment you can think of – animal … hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. From these data it is possible to answer a wide variety of …

… and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon … gauntlet of other cell defenses that could prevent viruses from successfully replicating, even if they managed to enter … resource (award DEB170007), and through a Challenge Grant from the California NanoSystems Institute at the University …

… as well as degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with …

… led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal … origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.  Science.  2012;336: 1715-1719. … Selected Publications …

… Lentinula   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the … A  new analysis takes a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. …

… and metabolomics. Proposals must request capabilities from both JGI and the Molecular Foundry.  Submission …