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The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata
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Genomic Identification and Characterization of Saxitoxin Producing Cyanobacteria in Western Lake Erie Harmful Algal Blooms
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Matt Blow
… and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. … Nature 557:503-509. Blow et al 2016. The Epigenomic Landscape of Prokaryotes. PLoS Genet 122:e1005854. Nord Et … 3426157. Blow et al 2010. ChIP-Seq identification of weakly conserved heart enhancers. Nat Genet 429:806-10. …
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Doubling Down on Known Protein Families
… into the uncharted territory of understanding the vast landscape of functional diversity, but we have also pushed … by environment and found only 7% of protein families were shared across all eight environmental categories. Instead, … specific environment — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing something …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass)
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Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina)
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Access to Rock Star Scientists
… Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to …
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JGI@25: Solving the Mystery of the Missing Oil
… & Environment Meeting: “What we wanted to do was apply a systems biology approach to the oil spill, looking at … models for cellular properties, communities and ecosystems.” Building off multiple collaborations, Lab …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… in scale when running on DOE’s  exascale computing systems,” added Kathy Yelick, a professor of electrical … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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A More Intuitive Phytozome Interface
… building high performance user interfaces and backend data systems. Trying to maintain v12’s codebase and legacy data … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their studied … across the bioeconomy. Summary As described in a  recent  mSystems paper , a team at the DOE Joint Genome Institute … helps researchers utilize gene markers across different ecosystems to better understand how nutrients are used and …
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