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… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes … their funding sources: Office of Biological and Environmental Research of the U.S. Department of Energy grant …

… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal … to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to …

… The JGI User Executive Committee (UEC) recently welcomed three new members … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career …

… As warm-adapted microbes edge polewards, they’d oust resident tiny … consequences on the entire food web, and therefore ecosystem services that we all depend on,” said Mock. Mock and … and stark the biogeographic boundary is between them. The data is somewhat beautiful in that regard,” said Andy Allen, …

… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s … individual contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the … write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …

…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …

… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made …

… the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The … J., Terry, A. et al. The DNA sequence and comparative analysis of human chromosome 5. Nature. 431, 268–274 (2004). …

… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for the first … Blurring the Line Between Plasmids and Phages …