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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … ability make zealexins, and harnessed gene expression data from these lines to identify genes associated with zealexin …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral … own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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Ben Bowen
… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the … researchers to discover novel lineages of life and move from the identification of microbial novelty to assigning …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics … Joint Genome Institute after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when sunlight becomes scant, Ace … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this …
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Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in … all the work that went into this program was the feedback from the graduate student interns; “it changed what I want …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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