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Expression of a mammalian RNA demethylase increases flower number and floral stem branching in Arabidopsis thaliana
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High-quality RNA extraction and the regulation of genes encoding cellulosomes are correlated with growth stage in anaerobic fungi
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first step in the deadly … opportunity to study how DGRs work and develop more of them into new biological tools. … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Co‑cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules, dockerins, and pyruvate formate lyases on specific substrates
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands … 2013, this field was just beginning to develop and expand into the world of evolutionary biology. And around that …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof …
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Learning to Look
… Machine learning approach significantly expands inovirus … which are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … phages!” said Krupovic. “We can now start inquiring into their impact on microbial communities in the …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite … who nominated species for sequencing and then sent DNA and RNA samples to JGI,” Grigoriev said. All of these …
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