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Trent Northen
… products. Proceedings of the National Academy of Sciences. 2021 May 4;118(18). https://doi.org/10.1073/pnas.2019855118 … metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. … Genome Engineering Enables Rapid Activation of Biosynthetic Gene Clusters. Nat Microbiol. 4(12):2498-2510. doi: …
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Mapping the Earth’s Hidden Fungal Kingdom
… massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past … have been named. Among those sequenced, roughly half of all genes have completely unknown functions — like a vast library of books written in a …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The Science … changes. Researchers were able to identify specific genes that allow the algae to adapt to sudden drops in salt … cell death.  Scientists then extracted RNA to analyze gene expression, to determine which genes are active under …
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An Addiction Crucial to a Fungus’ Reproduction
… organisms (symbionts) are transmitted between host generations, researchers investigated the role that bacteria … have on fungal host reproduction, and the reproductive genes they regulate. The bacterial endosymbiont, … evolutionary transition. Using this model, researchers also generated the first transcriptomic dataset of sexual …
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Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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JGI@25: Studying Sorghum’s Survival Skills
… each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) … over 50 other diverse sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and … team collect diverse lines of sorghum to understand what genes exist across the species. Earlier pan-genomes for …
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The More the Merrier: Making the Case for Plant Pan-genomes
… of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and many … after polyploidization,” said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author …
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Novel spore-forming species exhibiting intrinsic resistance to third- and fourth-generation cephalosporins and description of Tigheibacillus jepli gen. nov., sp. nov.
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A Plant Root Atlas for Tracking Developmental Trajectories
… Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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The Case for Conservation
… genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple biotechnological … moss sex chromosomes continue to evolve so rapidly in gene content and structure. He and JGI Plant Program head … improve crop breeding. For example, Schmutz noted, specific genes of interest could be associated with a plant’s sex. …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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