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… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … growth and reproduction—most organisms produce a set of "secondary metabolites," chemical compounds that often … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … …

DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole … I’ll take that knowledge back with me.” Now a second-year evolutionary biology student in David Ardell’s lab, he also …

… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … H. et al. 2019 Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell. …

… cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … composition variants. Summary In the  May 8, 2020 issue of  Science , a team led by Tobias Erb, director of the MPI …

… data set will help identify how different elements of the ecosystem interact and respond to changes in the … researchers came from two environments: natural forests and plantations managed through human intervention. By … by the trees and associated microbial communities. This revealed key metabolic pathways and metabolites associated …

Analysis reveals the microbial community involved in a bioremediation … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … bioremediate toxic substances has led to the development of cost-effective environmental cleanup strategies. Summary …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented …

A special issue of Synthetic Biology celebrates research enabled by the JGI … and synthesis work. This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Terpenes are made via a tangled network of enzymes in plants. To better pinpoint the biosynthetic routes that …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … reason for studying rumen: Livestock live off plant matter, and their rumen are highly capable of breaking …

Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and … (Austria) … Krinos et al. 2024. Time-series metagenomics reveals changing protistan ecology of a temperate dimictic …

The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and …

… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in … After working on his post-doctoral position with the Plant and Microbe Interaction group at Oak Ridge National …