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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the … novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven science program — …
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JGI on the 2020 Highly Cited Researchers List
… to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true … , Susannah Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology that … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux are part of …
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Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing … Berkeley National Laboratory (Berkeley Lab). In their analysis, they found the salinity changes led the algae to … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …
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A Step Toward Controlling Soybean Rust
… pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust … as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … sequencing a reference genome for  P. pachyrhizi to develop better strategies to counter soybean rust disease. …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Spreading of Aqueous Solutions of Trisiloxanes and Conventional Surfactants over PTFE AF Coated Silicone Wafers
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Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage … This work conducted by the U.S. Department of Energy Joint Genome Institute …
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