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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the … novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven science program — …
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JGI on the 2020 Highly Cited Researchers List
… to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true … , Susannah Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology that … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux are part of …
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Providing biological context for GWAS results using eQTL regulatory and co‐expression networks in Populus
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing … Berkeley National Laboratory (Berkeley Lab). In their analysis, they found the salinity changes led the algae to … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …
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A Step Toward Controlling Soybean Rust
… pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome … sequencing a reference genome for  P. pachyrhizi to develop better strategies to counter soybean rust disease. …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… network of field research sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Spreading of Aqueous Solutions of Trisiloxanes and Conventional Surfactants over PTFE AF Coated Silicone Wafers
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Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage … This work conducted by the U.S. Department of Energy Joint Genome Institute …
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