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Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis
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Massie S. Ballon
Ms. Ballon has a degree in molecular biology & biochemistry from Wesleyan University, and a graduate certificate in science communication from UC Santa Cruz. She is one of the Biosciences Area …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… the Bigelow Laboratory for Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth …
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Emiley Eloe-Fadrosh
… focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify … et al. 2021. A genomic catalogue of Earth’s microbiomes. Biotechnol . doi: 10.1038/s41587-020-0718-6. Wood-Charlson EM, … about an uncultivated virus genome (MIUVIG). Nature Biotechnol. 37:29. Bowers et al. 2017. Minimum information …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant … of Wisconsin-Madison, and the Georgia Institute of Technology focused on microbial communities from freshwater … of Michigan; Kostas Konstantinidis, Georgia Institute of Technology; Trina McMahon, University of Wisconsin-Madison; …
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The Expanding Universe of Methane Metabolisms in Archaea
… provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) … because the database already contains metagenome datasets from a variety of environments, as well as tools for … Of the 10 MAGs reconstructed in the study, five were from undersampled or previously undescribed lineages, and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  … CRISPR-Cas systems to recognize and remove invaders’ DNA from their own genomes. One of these systems, the …
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Mateus Fiamenghi
… the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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The Power of One, Amplified
… single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring sediment sample. … potentially of use in fields ranging from agriculture to biotechnology and medicine, the vast majority in, on, and … remain unknown. In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the …
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Tina Clarke
… her HR journey after obtaining her BA degree in Psychology from Sonoma State University. Early on Tina knew the … Years later she received her MA degree in Counseling from John F. Kennedy University. As a Mediator she is …
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