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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Materials strategic initiative aims to enable the JGI user community to participate in the development and … million annually.  The team is working on developing new microbial strains that can synthesize other bio-based …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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Natural Prodcast Episode 4: Nancy Keller
… would say that when I first started out the natural product community was almost 100% bacterial. Only people working in …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult … an arduous wet lab process. Typically, after incubating microbial communities with labeled food or water, the …
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JGI at the AGU Fall Meeting
… on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention … continental-scale context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… on giant viruses — providing a perspective on giant virus diversity, and how sequencing and bioinformatics have sped … more than 5,000 data sets and thereby increasing RNA virus diversity five-fold.  Ivanova, Roux  and  Kyrpides  are all …
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SIPs with Standards
… Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… other standardized data resources that the global research community can access and use to manage the information being … Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist and JGI user Trina McMahon has been … to analyze 500 metagenomes from this sample set through the Community Science Program, it was the largest project the …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … aim to inform the engineering of stable, synthetic microbial communities to take advantage of their joint … CRAGE in a select group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics …
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Honey Bee Gut Microbiota Divvy Up Dinner
… But scientists have wondered exactly how the microbial community carries out its helpful metabolism: who’s …
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Accelerating Metagenomics Discoveries with Deep Learning
… in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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IMG Webinar Series
… Find a series of webinars related to our Integrated Microbial Genomics & Microbiomes portal. …
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