Results

Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … data, one of the most successful data management systems of their kind, deployed to tens of pharmaceutical and biotech … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Zhong Wang
… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … computational technologies (NanoPore, GPU, Cloud etc) and their applications in solving DOE’s most challenging … metagenome binning software … Education … Selected Publications … Software …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … an exciting range of new tools and capabilities to support their scientific investigations of biological and environmental systems.”  …
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … need. The organisms on our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … to warming through the whole soil profile. The goals of their FICUS proposal include assessing the distribution of …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …
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