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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth … our agricultural systems could become more sustainable through applications of microbiome science; our water …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … light on both when and how eelgrass adapted and evolved throughout its history. Their research, published in  August …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array …
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Calculating the Costs of Multiple Switchgrass Gene Copies
A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … variation available for selection to improve biofuel yield through a changing future. Switchgrass has multiple …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … show how soil microbes cycle nitrogen and carbon, or how freshwater ecosystems process methane and organic matter.  … SIP experiments. “I’m looking forward to seeing that come through, predicated on these data standardization efforts — …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … the flora, fire moss has adapted to conditions such as UV irradiation, heavy metal contamination, and drought. The moss …
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Uri Neri
Neri is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, academic and professional development experiences that increase …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … partner, either a eukaryotic microalga or a cyanobacteria, is known as the “photobiont.” Photobiont and …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … 1000s of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond profiling … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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