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Characterizing Communities: JGI Announces Latest CSP Portfolio
… of intent. Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on any proposals … said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to …
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Webinar: SIP technologies at EMSL and JGI
… microbes assimilating labeled compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom … EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to …
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A Plant Root Atlas for Tracking Developmental Trajectories
… of British Columbia, Philip Benfey at Duke University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed … 100,000 single root cells and combining the information with previously published datasets. The work was  recently published in the journal  Developmental …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal … it encompasses are more broadly applicable to the download processes from the other JGI Portals, as well. “For …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome … production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. … Chief Informatics Officer. Click to learn more about how the JGI supports the entire data life cycle through …
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An Earth Month Look at Sustainability Efforts at the JGI
… of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support … clean energy and environmental challenges. And many JGIers work to connect those big goals with their everyday …
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A More Intuitive Phytozome Interface
… data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … and inspire next-generation researchers while preserving biodiversity and yielding demonstrable economic benefits. …
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