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… updateable transcriptome resource spanning diverse plant species. It was developed to improve plant genome … descriptions. This resource also helps in performing cross-species comparative transcriptomics. *The HudsonAlpha Genome … Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for … their likely host. We’ve made all of that information fully free and openly available to the broader scientific …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? … The JGI doesn’t fund research; we provide the resources for free. 8.  Q: What makes a successful project? A: Combination …

… at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for … saprotrophs disassemble debris and dead organisms to free up their nutrients; mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  Across the forest types, …

… Proposals aim to sequence and annotate genomes from Antarctica to Africa to … provide more information on these ecologically relevant species. Another focus area was inter-organismal … Berkeley is interested in better characterizing the role endosymbiotic bacteria play on mating habits of Mucoromycota …

… dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as an endophyte, living between a plant’s root cells. The fungus is almost … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …

… methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He …

… advancing pathway analysis, optimization of cell- and cell free-based expression platforms, tools and data for … Development of cell-free based expression platforms: Only 10-20% of BGCs are … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? … together similar genes in different strains or related species. 21.  Q: How can we select & change for other …