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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data ecosystem is a … and help unravel these complexities  This ecosystem serves users better in the following ways: Data integration is …
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JGI@25: Using Team Science to Build Communities Around Data
… the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State … genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said the … Filling in the Plant Tree of Life …
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Natural Prodcast Episode 7: Ben Shen
… of that conference, and he and the conveners put on a great program. This is one of my favorite interviews so far – … to do it. You have the sequencing capacity, you have the bioinformatics, but also you have all the emerging technology … be useless unless you make the invention available to broad user groups. So, I view the project that we are working on …
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Secondary Metabolites Advisory Committee
… The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The Committee is … on the effective management and strategic objectives of the programs. The Committee serves as the Program's key … teams on how to operate and manage the particular Science Program. …
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JGI Advisory Committee
… on the Institute’s strategic, scientific, technical, informatics, management, and operational objectives. Serving … JGI advisory and executive committees, such as the User Executive Committee, the DNA Synthesis Science User Advisory Committee, the Fungal and Algal Program User Advisory Committee, the Informatics Advisory …
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FICUS-NERSC/KBASE
… of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … as needed), and the work plan is written into a Statement of Work document. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… on graduate student mental health, and an outreach program to get kids interested in microbiology and microbial … we have a little bit wider spread since we're just doing bioinformatic searches. The majority of them are actinos, but … an area that's really a huge area of unmet need within our community and thinking about how best to tackle these …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… leaf surface. More specifically, they found that microbial community composition and functional potential varied across … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Office of Science’s Biological and Environmental Research program because of its relevance to understanding the …
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Tanja Woyke
… in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which she deciphered … and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed the Deputy Director of User Program position in 2021. In addition to her JGI …
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Partners
… others providing complementary expertise to advance the science and serve as impact multipliers . The JGI has a … the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … Program has been a pillar stepping stone in my bioinformatics learning and career development,” she noted. …
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Team Science Reveals Important Protein in Poplar
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to produce desirable traits.  Partly enabled by the JGI  Community Science Program New Investigator program , BNL scientists focused on … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of …
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