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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, … of researchers from the French National Institute for Agriculture, Food and Environment (INRAE), Hungary’s …
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A Community Resource for Secondary Metabolite Researchers
… public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it … a variety of fields including biotechnology, medicine and agriculture. This comprehensive public repository of BGC … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …
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2025 NeLLi Symposium
Natarajan Google Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a … Dartmouth University See full agenda at the bottom of this page. … Check back for information on venue and lodging.  … … below is as follows:  100% Refund upon request prior to 08/31/2025 50% Refund upon request prior to 10/31/2025 No …
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Plant Pan-Genomics Comes of Age
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An Integrated Dataset to Understand Ecosystem Interaction
… managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … — with potential applications in sustainable forestry and agriculture, as well as for improving the resilience of …
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Cataloging the Microbes that Manage the Health of River Systems
… environmental and human health, energy production and agriculture. Understanding the compositions of river … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols … Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing data, along …
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Clades of huge phages from across Earth’s ecosystems
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Fungal Friends or Foes in Plant Roots
… researchers at the French National Research Institute for Agriculture, Food and Environment (INRAE) and the U.S. … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by … Science of the U.S. DOE under Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing …
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Natural Prodcast Episode 22: Alison Narayan
… nature does this with such elegance And also to take advantage of the biological properties that these molecules have … to test that hypothesis through site-directed mutagenesis, we would end up with dead enzymes. So often, when … run things in like little Eppendorf tubes, or in 96, or 384 well plates. But then the fun really starts when you’re …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Thousands of small, novel genes predicted in global phage genomes
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Extreme dimensions — how big (or small) can tailed phages be?
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