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… An assay used for profiling transcription factor binding sites across … samples in 96-well plates on automated liquid handler platforms, substantially increasing efficiency and scalability. … analytical standards to accurately measure environmental microbiome activity levels. Learn more about SIP …

… discoverability and accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will be reused for further science.  Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any inconvenience. …

… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these …

… program, plays a central role in advancing this frontier by supporting the scientific foundations that drive … and AI-driven analyses that convert biological information into actionable insights and solutions. … conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and other high-value …

… in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … Plant microbiomes hold the amazing ability to influence plant … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this …

… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …

… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) … One test was to predict traits of more than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also …

… Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data … . 39(5):578-585. Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . …

… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …

… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise …