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User Executive Committee Charter
JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI … users and their science including technical capabilities offered, proposal review procedures, and the annual user …
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Game On: High School Students Drive Everglades Metagenomics Study
… soil sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate … approved proposal – including the submission of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …
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Natural Prodcast Episode 2: The Primer, Part 2
… very early history of the field. If you continue on, in the next episode you’ll hear us talk about the modern history of … is similar to primary metabolism. So if you were, you know, sequencing an organism for the first time, and you’ve never … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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JGI@25: Using Team Science to Build Communities Around Data
… “We currently have 19 genomes sequenced, 15 that are in sequencing or assembly right now, and eight more that we are … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … on Phytozome  … Filling in the Plant Tree of Life … Fungal Dataset … Plant Datasets … Genome Insider …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … capabilities to help advance their science by generating data in three overarching categories: Sequencing, Synthesis and Metabolomics. Strong internal …
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Synthetic Biology Lab
We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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Natural Prodcast Episode 20: Brian Bachmann
… which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … a postdoc and went to industry to see what they had, what data they had. DAN UDWARY: And they had a lot of data for … So happy to see you. And looking forward to the next couple of days of the conference. BRIAN BACHMANN: …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis … and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … and operational themes and objectives for the next five years. It also includes more than 130 …
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The JGI Data Portal: Improving User Experience
… technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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