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… changes in marine microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. … (PNNL). Researchers have the opportunity to combine the power of genomics and molecular characterization offered at …

… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative … domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down … on a project award ( https://doi.org/10.46936/cpcy.proj.2021.60161/60000437 ) under the FICUS program to JEM and …

… gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic … For further details, please reach out to the Group Lead …

… say a clutch is probably the size of a golf ball and has 25 to 50 eggs. I’m guessing here.  DAN: Sure, sure.  MARCY: … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … massive problems just as much as it brings about massive data into really interesting ways to look at our systems. …

… Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …

… technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from … — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …

… went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … a postdoc and went to industry to see what they had, what data they had. DAN UDWARY: And they had a lot of data for … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding … virions (700 nm in diameter) to much smaller virions (120 nm in diameter). Across the phylum  Nucleocytoviricota , … approaches. One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference genomes to …

… of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness … genome-encoded metabolic capabilities and interactions. Supported by JGI’s ETOP, this new tool will now be available …

… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … discovery and applications. This program has supported over 250 projects since it started. At the JGI, … and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction …