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Nikos Kyrpides
… for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined … GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …
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Diverse ecophysiological adaptations of subsurface Thaumarchaeota in floodplain sediments revealed through genome-resolved metagenomics
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Biotechnological Innovations through Fungi
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Special Initiatives & Programs
… support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity Announcements ,  Science … funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and … BERSS). Available Resources All JGI products are available through BERSS. Learn more about our  offerings, capabilities …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… All of the annotations and data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome … biological systems. By making the tools and data available through MycoCosm — a platform widely used across the … these two genomes is not fixed, but continues to shift through ongoing evolutionary processes. The team then …
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An Integrated Dataset to Understand Ecosystem Interaction
… feedstock. Public accessibility to the data made available through this multidisciplinary approach allows researchers … were turned on or off in response to its surroundings — illuminating the molecular mechanisms for adaptation within … and 314 metabolomic profiles — combined offers the global research community insights into how these trees …
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Frederik Schulz
… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … a single-cell-based discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches … et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 (7795), 432-436 …
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Global Diversity and Biogeography of the Zostera marina Mycobiome
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Megaphylogeny resolves global patterns of mushroom evolution
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Ecology and molecular targets of hypermutation in the global microbiome
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