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… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. …

… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet … technology in order to enhance the quality of single-cell genomes and directly link functional information with …

… Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – we work for the US … Secondary Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long … cells and produce enough that way in really large like 7500 Liter bioreactors.  ALISON: Cool.  DAN: And then a few …

… The Community Science Program (CSP) provides the scientific community at large with access to … synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through … JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI …

… 6 of Natural Prodcast. What you’re going to get here is the very first episode we recorded. You’ll probably notice that … the secondary metabolism side of things was looking at genomes and seeing where the really hard things to sequence … over time. And yeah, I mean, that was let’s see, maybe 5,6,7 years ago, and I’ve – I haven’t looked back. ALISON: So …

… Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … various bioinformatic tools and comprehensive curated databases, including nomenclatural and genomic information … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… Questions about our proposal submission process. You can review successful letters of intent and submissions at the … Review the list of open calls ; click on the call link to see … of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal submission …

… An improved genome assembly to support targeted tree breeding for … eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to … sets of chromosomes inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … final dataset – available to the research community on an online interactive browser – contains the phenotypic records …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … and select “Genome Archive – All data” as the database, and choose the genome you’re after as the dataset. …

… Research yields a comprehensive tree and soil dataset for understanding the dynamic … processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …