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Jeremy Schmutz
… MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome resource to improve … 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis enables discovery of agronomically valuable … Selected Publications …
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CSP Functional Genomics
… and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and track record of the applicant.  Learn about the general review process or find details on the internal … For general questions, please reach out to Christa Pennacchio, …
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JGI on the 2020 Highly Cited Researchers List
… a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  The work also led researchers to identify a gene related to seed dispersal in wild populations for the … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass
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Secrets of the Needles: What Microbes do on Conifer Leaves
… The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as well as genes for breaking down complex plant polymers. These … Stories Behind the Science: Decoding the Genes of Unseen Communities …
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Genetic and biochemical diversity of terpene biosynthesis in cyanobacterial strains from tropical soda lakes
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Natural Prodcast Episode 18: A CSP Primer
… I think for Natural Prodcast, I think the question that generally comes up that people come to me asking like is– … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … (LAUGHS) Yeah. We do expect that or hope that a publication comes out of the work that’s done at the JGI. …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these genes have moved from the mitochondria into the nuclear … are closely aligned across fungi, validating mitochondrial genes as reliable markers for classifying species and …
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… such as fully annotated genome assemblies or differential gene expression results. For DNA synthesis projects, JGI … and phototrophs. Note that utilization or transfer of any genetic resource may be covered by local, national or …
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Functional Diversity of Diterpene Synthases in the Biofuel Crop Switchgrass
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