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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of Energy (DOE) …
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Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … a paper in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists …
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Streamlining the Design-to-Build Transition with Build-Optimization Software Tools
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Bioboxes: standardised containers for interchangeable bioinformatics software
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GenomeVISTA—an integrated software package for whole-genome alignment and visualization
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Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to …
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A Bioinformatician's Guide to Metagenomics
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Behind the Paper: Hot Springs Metagenomics
… Adapting the graduate research experience amidst a global pandemic   …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, … Setsuko Wakao, Meng Wang, and Allison Werner.   A total of 20 proposals were selected by the Joint Genome Institute … developing transformative bio-based technologies involving critical minerals and materials. The Joint Genome Institute …
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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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