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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following … Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or …
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Single Cell Research Group
… described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Director of Product and Market Development, Twist Bioscience Scott Clingenpeel: Industrial Hygienist, Berkeley …
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Natural Prodcast Episode 20: Brian Bachmann
… to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian Bachmann … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk … joining Vanderbilt who were doing drug discovery and neuroscience and other areas that were being very successful and …
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Environmental Genomics Group
… and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to … metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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JGI Announces 2023 Community Science Program Awardees
… of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … You can learn more about this year’s recipients on our Twitter. Samples were collected from across a permafrost …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … the big stuff, well, the little stuff! People hold office hours and you can pop in and ask them questions about all … kinds of topics. It’s amazing to have access to rock star scientists who have done the groundbreaking work you’ve been …
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Natural Prodcast Episode 15: Katherine Duncan
… into secondary metabolites? Kate Duncan: So I always liked science in school. I wouldn’t say I was one of these people … so I have an undergraduate in chemistry. Now when I was in fourth year, we had a choice to do an integrated master’s … up. And that is actually how I describe what I do to nonscientists. I think it’s quite accessible. I used to do the …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Natural Prodcast to come. Thanks for listening, and enjoy our talk with Aaron Puri. DAN: Jackie, we have one of your … a commentary about how quorum sensing has really captured scientists imaginations because it provides a hook into how …
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FICUS-NERSC/KBASE
… is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … negotiate project specifics with PIs (including JGI scientists as needed), and the work plan is written into a …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific journal is the ultimate achievement. To get to this point … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, …
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Microbiome Data Science: Understanding Our Microbial Planet
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Natural Prodcast Episode 19: Bill Fenical
… years. And I really want to make sure that we talk about your place in the field, because you’ve been at this for a … ask things all day. ALISON TAKEMURA: I wanted to ask, did scientists at that time just think that the ocean was kind … to then switch from financial support from the National Science Foundation to financial support from the National …
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