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FICUS-NERSC/KBASE
… is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … negotiate project specifics with PIs (including JGI scientists as needed), and the work plan is written into a …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … signing official must have the legal authority to commit your institution or organization to the terms and conditions …
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DOE Metrics
Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon …
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Natural Prodcast Episode 15: Katherine Duncan
… into secondary metabolites? Kate Duncan: So I always liked science in school. I wouldn’t say I was one of these people … so I have an undergraduate in chemistry. Now when I was in fourth year, we had a choice to do an integrated master’s … up. And that is actually how I describe what I do to nonscientists. I think it’s quite accessible. I used to do the …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the … only simplifies and streamlines this process, but enables scientists to conduct fundamental science experiments in …
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An Integrated Dataset to Understand Ecosystem Interaction
… between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and … through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of microbes living … trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art … function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … synthetic biology review process .  … Proposers are encouraged to review the JGI’s sample requirements . Samples …
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Natural Prodcast Episode 22: Alison Narayan
Products meeting earlier this year. And today we have our conversation with Professor Alison Narayan, from the … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … the field of biocatalysis and what needs to be done across science to to get a point where we can predict an enzymes …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's …
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New Lineages of Life Group
Our research is focused on the discovery and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … an expanded complement of translation system components. Science, 356 (6333), 82-85 Schulz et al. (2016) A …
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Natural Prodcast Episode 19: Bill Fenical
… years. And I really want to make sure that we talk about your place in the field, because you’ve been at this for a … ask things all day. ALISON TAKEMURA: I wanted to ask, did scientists at that time just think that the ocean was kind … to then switch from financial support from the National Science Foundation to financial support from the National …
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