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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … (award DEB170007), and through a Challenge Grant from the California NanoSystems Institute at the University of California Santa Barbara. S.C.B. was partially …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … of functional diversity as well.”  Researchers from Harvard University, Indiana University. University of Crete … University of Thessalonica (Greece), and the University of California, Berkeley were also involved in the work. Other …
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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JGI Accepts 17 Proposals for Community Science Program
Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … Andrew Nelson of the Boyce Thompson Institute at Cornell University seeks to understand and enhance the rubber … a drought tolerant shrub. Melissa Roth of the University of California, Berkeley aims to redesign and engineer algae by …
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … by a common ancestor to all five lineages. In the lab of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six … are accepted year-round; the next deadline is Jan. 29, 2024.  …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … the article. The research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven …
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How Filamentous Fungi Sense Food
… crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory Berkeley Lab), have taken stock … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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