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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps Institution of Oceanography. (Courtesy of B. Moore) DAN: This is the …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s … and then use nature’s SAR by having large, large sequence collections. DAN UDWARY: Warp Drive being the company that I …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … Project. Hacquard’s group had assembled a mycobiome culture collection consisting of fungal species from natural … The JGI sequenced and annotated 41 fungal isolates from the collection. The team then compared this dataset against …
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Matt Blow
… Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557:503-509. Blow et al 2016. …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … moving forward with density separation and fraction collection. 4. Q: Are there existing narratives, or plans to …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … love to grow some stuff like that. Just to have a little collection. DAN: All right. So, penicillin became such a …
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Silver age of GOLD introduces new features
… sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … resources including NCBI Taxonomy and various culture collections like the  American Type Culture Collection and the Leibniz Institute DSMZ . GOLD applies its …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors … fantastic scientific results this year by assembling a collection of large datasets that will enable scientists to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the … of Energy under Contract No. DE-AC02-05CH11231. The collection of the M. sinensis and M. sacchariflorus …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome … environmental bacteria from the Tiny Earth collection. The work builds upon a pilot project to sequence …
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Ian Blaby
… National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of eukaryotic algae, archaea and bacteria with a view to … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … in sequencing a lot more natural product-heavy culture collections, especially older culture collections and things that have sat kind of dormant. So …
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