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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In … resource that provides information at multiple scales from genes to the community level. The Impact Rivers are … sampling locations. Metatranscriptomic information was also generated. The 3.8 trillion bases or Terabases of sequencing …
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Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions
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Natural Prodcast Episode 2: The Primer, Part 2
… that produces those. So it’s not a hard and fast rule, but, generally, animals do not have secondary metabolism that we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … It’s an evolution of primary metabolism. So a lot of the genes and the DNA that’s used for secondary metabolism, they …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the …
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Natural Prodcast Episode 3: The Primer, Part 3
… and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do … what those molecules actually are, and then what their function might be. Whether that’s in nature, or whether …
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JGIota: Looking Back at Methane-Making Microbes
… gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant …
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Natural Prodcast Episode 10: A Primer on Genome Mining
ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … want to explain that to someone who doesn’t know much about genetics or anything else, science wise maybe, what genome … for people, but also those molecules that mediate a well functioning ecosystem and environment and earth. So yeah, …
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Natural Prodcast Episode 17: Cassandra Quave
… bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven future for plant natural … whether it’s for plants to make clothing, or musical instruments, or food, or medicine, which was really where my … that morning cup of coffee, that is a plant that has a functional activity. It’s a pharmacological agent that acts …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass … off. And that’s in a single lifetime, right? Or maybe two generations. And so, you know, and the real question is, can …
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Corals in Hot Water Get Help From Their Microbes
When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help …
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