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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic … biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data usage by the …
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Duplications and losses in gene families of rust pathogens highlight putative effectors
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DAP-seq Drives Robust Mapping of Gene Regulation
… plant lineages. Aligning with U.S. Department of Energy (DOE) interests, this advancement holds the potential to … at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sites are in the genome — those sequences are moving around, disappearing and appearing in new places.” With new …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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CSP Functional Genomics
… and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable without the capabilities and expertise available at the JGI. … will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data usage by the …
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DOE JGI Metagenome Workflow
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences … multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …
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Fungal Friends or Foes in Plant Roots
… and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that … and Environment (INRAE) and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal …
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Enlarging Windows into Understanding Gene Functions
… encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … workflow that reduces the time and cost associated with this purification step, and Baumgart continued and …
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JGI Announces 2023 Community Science Program Awardees
… of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of which …
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Domain shuffling and the evolution of vertebrates
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … proposals have been approved through the annual Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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