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Natural Prodcast Episode 21: Elizabeth Parkinson
… you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy today to be handing over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue … an area that's really a huge area of unmet need within our community and thinking about how best to tackle these …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a …    Authorship Guidelines JGI will provide all users with a list of JGI staff who contributed to their project, … Feel free to reach out to your Project Manager or JGI Science Program lead(s) to discuss authorship at any point. …
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Natural Prodcast Episode 15: Katherine Duncan
… because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been kind … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you … in plants, fungi, and microorganisms. If you want to collaborate, let us know. Find out more at  …
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FICUS-NERSC/KBASE
… of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics … is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) … features prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, …
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JGI-TMF Critical Minerals and Materials Call
… program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and developing … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … order by the reviewers. The ranked proposal list, along with a recommendation from management at the JGI and the …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… leaf surface. More specifically, they found that microbial community composition and functional potential varied across … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … land and the atmosphere. Microbes living there can interact with chemical defenses of plants and influence nutrient …
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Natural Prodcast Episode 6: Marc Chevrette
… that I wanted to include it. This is a conversation with Marc Chevrette. Marc is a postdoc in Jo Handelsman’s … describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … doing a postdoc now, and you are involved in a project that collaborates with JGI called the Tiny Earth project. Would …
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Natural Prodcast Episode 5: Brad Moore
… lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … a new organism in the lab, the new challenges there. We collaborated with a group at the J. Craig Venter Institute, …
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Natural Prodcast Episode 7: Ben Shen
… out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … in plants, fungi, and microorganisms. If you want to collaborate, let us know! Find out more at …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … it your baby in being released and how this can help the community. DAN UDWARY: Yeah. So OK. So SMC is the Secondary …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, in-depth molecular …
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